Designing, constructing, and managing viral vector plasmids can be challenging and time-consuming. Researchers often encounter several hurdles, but with the right support, these challenges can be overcome. Here, we explore common issues and how PackGene’s vector design and cloning service can simplify the process.

 

Common Challenges in Plasmid Design and Construction

  1. Selecting the Right Plasmid Backbone: Choosing an appropriate plasmid backbone is daunting. Researchers sift through literature and databases, seeking a sequence that ensures high virus yield and gene expression without compromising packaging efficiency. Despite extensive research and consultations, uncertainty often remains.
  2. Assembling Gene Elements: Identifying and integrating known elements such as promoters and genes of interest is labor-intensive. Ensuring proper arrangements, reading frames, and selecting suitable promoters and regulatory elements require meticulous attention to detail.
  3. Verifying Plasmid Sources: Using plasmids obtained from peers or inherited from previous team members without verification can lead to time-consuming sequencing efforts. Unverified plasmids may not meet current project needs, leading to further delays.
  4. Managing Plasmid Inventory: Keeping track of numerous plasmids within a team can become chaotic. Aligning digital records with physical storage, especially with poorly labeled tubes stored at -80°C, is a major headache.
  5. Reusing Gene Elements: When trying to reuse a gene segment from a previously synthesized plasmid, locating the correct plasmid can be frustrating. Limited budgets exacerbate the challenge of balancing cost and timeline while avoiding design errors.
  6. Avoiding Spontaneous Mutations: Frequent re-transformation of plasmids can accumulate spontaneous mutations in the backbone. These undetected mutations may eventually cause viral packaging failures or plasmid function loss, creating confusion and setbacks.

 

PackGene’s Solution: Vector Design & Construction Services

You don’t have to face these challenges alone. PackGene offers comprehensive vector design and construction services to streamline your research.

  • Vector Design & Construction Achieve seamless gene manipulation with our optimized AAV and lentivirus vector design and construction service.
  • Verified Vector Backbones Our vectors feature de novo synthesized, verified backbones, ensuring reliable plasmid design and avoiding unknown mutations.
  • Robust Backbone Library Explore our robust, pre-verified backbone library, the cornerstone for efficient plasmid design.
  • Extensive Gene Element Library Our extensive collection includes universal or tissue-specific promoters, regulatory elements, fluorescent protein genes, and reporter genes, synchronized with GeneBank for the latest human and mouse ORF clones.
  • Proven RC Plasmids Our RC plasmids, tested across many production batches, deliver improved virus production.
  • Secure Digital Management: Easily reorder and manage vectors securely. All vectors, whether designed, synthesized, or customer-provided, can be securely managed and easily reordered digitally.
  • Ready-to-use Gene Elements: Common promoters, regulatory elements, and reporter genes are already synthesized and ready to assemble into your plasmid without any synthesis fee.

 

piVector Designer Tool

PackGene simplifies your plasmid design and construction, allowing you to focus on your research. Rely on us for optimized vectors, extensive gene element libraries, and secure digital management. Use our recently launched piVector Designer tool to design and order AAV vectors

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Free Cloning with Virus Packaging or Plasmid Prep

Ready to accelerate your research? Explore our piVector design tool, place your orders, and seize the opportunity to win big!

  • Unlock addiltional Value! Place an order for virus packaging or plasmid prep and receive FREE cloning services. Trust our expertise to elevate your research endeavors.
  • Free Gene! No gene synthesis fee charged if choosing presynthesized gene elements from piVector Design database.

Act fast – this exclusive offer expires on Aug 31st!

Send us your feedback after you submit your project via our piVector Online order. Your feedback is invaluable to us as we strive to improve our services. As a token of our appreciation, we’re offering a chance to win gift cards by providing your feedback.

More information about our AAV and lentivirus construction service

Specialized AAV Plasmid Design and Construction

AAV Plasmid Design and Construction: PackGene is dedicated to providing high-quality AAV vectors tailored to your needs. Our piVector Designer tool allows you to select and assemble gene elements specific to your application into the AAV vector backbone. We offer both single-strand (ssAAV) and self-complementary AAV (scAAV) vectors, with the latter offering significantly higher transcription efficiency.

Gene Overexpression: Customize various elements, including promoters, genes of interest, regulatory elements, and poly A signals. Incorporate secondary reporter expression cassettes with fluorescent proteins, like EGFP and mCherry, using our piVector Designer tool. Our extensive promoter and GOI library enhances your customization options.

Gene silencing: PackGene offers AAV vectors for protein translation reduction via short-hairpin RNA (shRNA), a widely used RNAi method. Our vectors express shRNA under the H1 or U6 promoter and co-express a reporter protein.

RNA interference (RNAi) is a specific tool for protein knockdown, driving mRNA degradation and reducing translation. Endogenously present in most eukaryotes, RNAi is used for gene function studies, drug discovery, and therapy. AAV vector-based RNAi shows prolonged mRNA target reduction in live animals.

PackGene’s shRNA vectors offer:

  • Efficient Expression: Direct and convenient shRNA expression for in vivo experiments.
  • Targeted Delivery: Specific organ and tissue targeting through AAV serotypes.
  • Durability: Longer effect duration compared to synthetic shRNA.
  • Safety: Increased safety and reduced immunogenicity.

CRISPR Gene Editing: Our proprietary Cas9 expression vectors, available in dual or all-in-one formats, co-express SpCas9 or SaCas9 and sgRNA. We offer SpCas9 and SaCas9 high-fidelity versions and vectors for gene activation and alternative Cas9 variants like NmCas9, AsCpf1, and LbCpf1.

 

Lentivirus Plasmid Design and Construction

PackGene offers a diverse range of lentiviral vectors tailored for gene overexpression, shRNA expression, and miRNA regulation to support various research and therapeutic applications.

Gene Overexpression Vectors
Our vectors are engineered to enhance gene expression within target cells, essential for studying gene function, modeling diseases, and exploring therapeutic applications. We clone your gene of interest into our pre-designed vectors, ensuring sustained expression through genomic integration.

shRNA Vectors
Designed for gene silencing, PackGene’s shRNA lentiviral vectors express shRNA sequences processed into siRNA, targeting mRNA for degradation. These vectors are vital for knocking down gene expression and observing phenotypic changes.

miRNA Vectors
Our miRNA lentiviral vectors are customizable for overexpression or inhibition of specific miRNAs, providing insights into miRNA-mediated gene regulation. These vectors are valuable for research and developing miRNA-based therapies, particularly in cancer.

About PackGene

PackGene Biotech is a world-leading CRO and CDMO, excelling in AAV vectors, mRNA, plasmid DNA, and lentiviral vector solutions. Our comprehensive offerings span from vector design and construction to AAV, lentivirus, and mRNA services. With a sharp focus on early-stage drug discovery, preclinical development, and cell and gene therapy trials, we deliver cost-effective, dependable, and scalable production solutions. Leveraging our groundbreaking π-alpha 293 AAV high-yield platform, we amplify AAV production by up to 10-fold, yielding up to 1e+17vg per batch to meet diverse commercial and clinical project needs. Moreover, our tailored mRNA and LNP products and services cater to every stage of drug and vaccine development, from research to GMP production, providing a seamless, end-to-end solution.

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